This document contains information about the status, content and schedule for next release of the CCP4 software suite (5.0).
The timetable is available via the "CCP4 Releases: Information for Developers" page.
Go to
http://www.ccp4.ac.uk/bugzilla/
NB: Bugs are reported as "ccp4" "5.0.a".
| Title | Assigned to | Status | Comments | Priority |
|---|---|---|---|---|
| New Licence | PJX/KSW/all | Ongoing | PJX/MHE met Jackie Potts (CCLRC sales and contracts) 11/8/03, who will provide new draft in corporate style. Still need to update: COPYING files, banners and manual |
Critical | REFMAC/LIBCHECK | PJX | Ongoing | PJX needs to obtain latest dictionary from Garib. Compatibility problems with new libs (Andrew Sharf) appear to be resolved. | Critical |
| MOSFLM | CCB | Ongoing | Has (severe?) known bugs - fixes expected from HP before release | Critical |
| FFTW | MDW/CCB | . | MDW: now has licence and source code, currently CVSing and setting up configure/build. Some aspects of licencing wrt CCP4 licence may still need tweaking, e.g. FFTW may be Part 2 software? |
Critical |
| Title | Assigned to | Status | Comments | Priority |
|---|---|---|---|---|
| Windows version | PP/MDW/AWA/CCB | Ongoing | PP and MDW now compile all progs except ccp4mapwish and HBOND. Recurrent problem in fftlib manifesting itself in runtime errors in BEAST, SFALL, REFMAC and others. Harvesting still needs to be tested. | High |
| Xtals in CCP4i | MDW/PJX | Ongoing | MDW to document in CC4P4i help. PJX to examine/test updated interfaces. | High |
| IFC build | AWA/PJX | In progress | PJX to check if there is still a problem with configure being unable to find system rx package when using shared libs. | High |
| configure script | MDW/ALL | . | Make sure that new options are displayed with -h and written to to config.status. | Low |
| Split off MMDB build | MDW | DONE | . | N/A |
| C header files in CCP4 include | CCB | Dropped for 5.0 | . | N/A |
| Db Handler | PJX | ON HOLD | Development currently halted | N/A |
| Title | Assigned to | Status | Comments | Priority |
|---|---|---|---|---|
| Build on Itanium/Linux64bit | CCB | DONE | Build works on SGI Itanium machine. Not yet tested on HP Itanium provided by Tassos. | N/A for 5.0 |
| Miscellaneous CCP4i fixes | PJX | DONE | . | N/A |
| Data harvesting management tool | PP | DONE | . | N/A |
| ClustlW interface | PP | DONE | . | N/A |
| Symm/cell/resoln in .mr files | PJX | DONE | . | N/A |
| Scatter plots in loggraph | CCB | DONE | . | N/A |
| CVS tags in CCP4i code | PJX/All | DONE | Implemented in files in src & utils | N/A |
| Multiple logfiles/loggraphs in CCP4i | PJX | DONE | Implemented 17/01/2003 | N/A |
| Configure to check for presence of C++ etc | ? | Dropped for 5.0 | . | N/A |
| Title | Assigned to | Status | Comments | Priority |
|---|---|---|---|---|
| MapSlicer extensions | PJX | Deferred | Some changes added (changed handedness, use UVW instead of XYZ for Harkers). Still to do: add Preferences cf loggraph | Low |
| Python scripts in CCP4i | MDW | Deferred | May need testing/tidying | Low |
| AREAIMOL interface | PJX | DONE | . | N/A |
| Removal of Refmac4 interface | PJX | DONE | . | N/A |
| CCP4i under Tcl/Tk 8.4 | PJX/CCB | DONE | . | N/A |
| Improved task installer | PJX | Dropped for 5.0 | . | N/A |
| CCP4i job list tools | PJX | Dropped for 5.0 | . | N/A |
| Title | Assigned to | Status | Comments | Priority |
|---|---|---|---|---|
| BULK | MDW | Ongoing | Two progs (BULKING and PREP_BULK) need documenting. | High | MOSFLM CCP4i interface | PJX | Ongoing | Still needs bug fixes and modifications suggested by HP | High |
| WHAT_CHECK | AWA | DONE | Will be distributed as "plug-in" package from ftp site | N/A for 5.0 |
| Clipper | CCB | DONE | May be reactivated if Kevin makes another update (contact CCB in this event?) | N/A |
| Polarrfn | MDW | DONE | . | N/A |
| SCALA | PJX/MDW | DONE | . | N/A/td> |
| SFTOOLS | MDW | DONE | Needs update for xtals - contact Bart Hazes | N/A |
| BEAST | AWA | DONE | . | N/A | MOLREP | AWA | DONE | . | N/A | SFCHECK | AWA | DONE | . | N/A | TopDraw | PJX | DONE | . | N/A | Acorn | PJX | DONE | . | N/A | MapView | CCB | Not for inclusion in 5.0 | Paul Emsley | N/A |
| RasMol | CCB | DONE | . | N/A |
| MMDB-based programs | MDW | DONE | e.g. PDBcur | N/A |
| Dtrek2Scala | AWA | DONE | . | N/A |
| OASIS | PJX | DONE | . | N/A |
| BULK | PJX | ON HOLD | EJD to assess | N/A |
| BP3 | CCB | ON HOLD | . | N/A |
| Title | Assigned to | Status | Comments | Priority |
|---|---|---|---|---|
| New tutorials | PJX | Ongoing | Check with Maria concerning current status, add those which are currently available to the suite. | High |
| Installation documentation | ALL | . | Need to add new configure options and new dependencies (e.g. C++ libs) | Low |
| New library documentation | MDW | Ongoing | Fortran "old-library" documentation needs to be updated. | Medium |
| Document Data Harvesting Management Tool & ClustalW interface | PP | DONE | . | N/A |
| Maths for xtallographers | AWA | DONE | . | N/A |
| Interactive CCP4i tutorials | PJX | ON HOLD | From Maria. | N/A |
Use this area as a "scratch pad" - add items which are unassigned etc
Auto-build logs are available here.
This section last updated 30/06/2003
| Date | Hostname | O/S | Version | Compiler info | Configure | Make | Install | Run-all | Others | Comments |
|---|---|---|---|---|---|---|---|---|---|---|
| 30/6/2003 | dlpx1 | IRIX | 6.5 | Native | irix --with-x | . | . | OK | ? | Build failed due to lack of disk space (30/6/03) |
| 28/6/2003 | dlpx1 | IRIX | 6.5 | Native | irix --with-x --with-shared-lib | . | . | OK | OK | . |
| 30/6/2003 | ccp4g | OSF1 | 4.0 | Native | osf1 --with-x | . | . | Refmac5 exe too big to run - others ok | Mosflm test ok | Same using shared libs |
| 3/6/2003 | ccp4l | SunOS | 5.8 | Native | sunos64 --with-x | . | . | ? | ? | Static lib build failed due to lack of disk space (30/6/03) Shared lib build fails in CCIF (28/6/03) |
| 3/6/2003 | ccp4h | Redhat Linux | 8.0 | gcc 3.2-7 | linux --with-x | . | . | ? | ? | Build failed due to lack of disk space (1/7/03) |
| 3/6/2003 | ccp4h | Redhat Linux | 8.0 | gcc 3.2-7 | linux --with-x -with-shared-lib | . | . | icoefl.exam fails | Mosflm fails | . |
| 30/6/2003 | ccp4h | Redhat Linux | 8.0 | Intel Compiler 7.0 | linux_intel_compilers --with-rxdispencer --with-x | . | . | OK | Mosflm fails | . |
| 28/6/2003 | ccp4h | Redhat Linux | 8.0 | Intel Compilers 7.0 | linux_intel_compilers --with-rxdispencer --with-x --with-shared-lib | TBA | Fails to build Mosflm | . | All fail due to missing libccif.so | Fails - no mosflm exe |
| 3/6/2003 | ccp4port2 - new laptop | Redhat Linux | 7.3 | gcc 2.96-110 | --with-x linux | OK | OK | OK | . | . |
| 3/6/2003 | ccp4port2 | Redhat Linux | 7.3 | gcc 2.96-110 | --with-x --with-shared-lib linux | OK | OK | some fails - watertidy3-shells | . | icoefl and sf_calc fail in run-all but ok by hand. |
| 3/6/2003 | kemvig2 - Kats Machine | Redhat Linux | 9.0 | gcc 3.2.2-5 | --with-x linux | OK | OK | OK | . | . |
| 3/6/2003 | kemvig2 | Redhat Linux | 9.0 | gcc 3.2.2-5 | --with-x --with-shared-lib linux | Fails on ccif | . | . | . | . |
| 30/6/2003 | ccp4k | SuSe Linux | 7.3 | gcc | linux --with-x | . | . | Failures for arp_waters.exam, refmac5_tls.exam, beast.exam | Mosflm test ok | . |