Bioxhit_db Documentation

Reference:
The BIOXHIT project is funded by the European Commission within its FP6 Programme, under the thematic area "Life sciences, genomics and biotechnology for health", contract number LHSG-CT-2003-503420

This documentation is for the CCP4 BIOXHIT database handler and related software.

• Installation notes - overview of how to install the system
• Description of CCP4 DB Handler - description of CCP4 DB handler usage, communication protocols and available commands
• CCP4i Tracking Database Schema - a description of the communication protocols between the handler and client applications.
• Communication protocols - a description of the communication protocols between the handler and client applications.
• SQLite_setup - how to install SQLite for embedded database backend

• Tcl client API - Tcl API functions available to client applications to interact with the handler
• Python client API - Python API functions available to client applications to interact with the handler

• dbviewer - description of CCP4 DB viewer usage & features.
• dbconsole - "console" applications for Tcl and Python client APIs

• ccp4i.py - Python module providing classes and methods for interacting with CCP4 environment and CCP4i def files

• tests - documentation for test scripts and manual test procedures