CCP4 NEWSLETTER ON PROTEIN CRYSTALLOGRAPHY

An informal Newsletter associated with the BBSRC Collaborative Computational Project No. 4 on Protein Crystallography.
Number 49 Summer 2013

Click here for the complete issue as a single PDF document.

Contents

    News

  1. What can electron microscopists and crystallographers learn from each other?   1-3
    Chris Wood
    Scientific Computing Department, STFC Rutherford Appleton Laboratory, Didcot, OX11 0FA

    2. Software

  2. CCP4 Package Manager   4-10
    Eugene Krissinel & Andrey Lebedev
    CCP4, Research Complex at Harwell, Rutherford Appleton Laboratory, Didcot OX11 0FA, UK

  3. CCP4 Web Services   11-12
    Ville Uski
    CCP4, Research Complex at Harwell, Rutherford Appleton Laboratory, Didcot OX11 0FA, UK

  4. Python dispatchers for CCP4   13-15
    David G. Waterman
    CCP4, Research Complex at Harwell, Rutherford Appleton Laboratory, Didcot OX11 0FA, UK

  5. The DIALS framework for integration software   16-19
    David G. Watermana, Graeme Winterb, James M. Parkhurstb, Luis Fuentes-Monterob, Johan Hattnec, Aaron Brewsterc, Nicholas K. Sauterc & Gwyndaf Evansb
    aCCP4, Research Complex at Harwell, Rutherford Appleton Laboratory, Didcot OX11 0FA, UK
    bDiamond Light Source Ltd, Harwell Science and Innovation Campus, Didcot, OX11 0DE, UK
    cLawrence Berkeley National Laboratory, 1 Cyclotron Rd., Berkeley CA 94720, USA

  6. SynchLink: an iOS app for viewing data interactively from synchrotron MX beamlines   20-24
    Helen Ginna,b, Ghita Kouadri Mostefaouia, Karl Levika, Jonathan M. Grimesa,b, Martin A. Walsha, Alun Ashtona & David I. Stuarta,b
    aDiamond Light Source Ltd, Diamond House, Harwell, Didcot, Oxfordshire, OX11 0DE, UK
    bDivision of Structural Biology, The Wellcome Trust Centre for Human Genetics, University of Oxford, Roosevelt Drive, Headington, Oxford, Oxfordshire OX3 7BN, UK

    7. Methodology

  7. Integrating crystallographic structure determination and visualization: remote control of Coot   25-32
    Nathaniel Echols & Paul D. Adams
    Lawrence Berkeley National Laboratory, Berkeley CA

  8. Introduction to R for CCP4 users   33-44
    James Foadi
    Membrane Protein Laboratory, Imperial College London and Diamond Light Source Ltd, Harwell Science and Innovation Campus, Didcot, Oxfordshire OX11 0DE, UK

Editors: Karen McIntyre and David Waterman CCP4, SCD Department, STFC Rutherford Appleton Laboratory, Didcot,
Oxon, OX11 0FA, UK
NOTE: The CCP4 Newsletter is not a formal publication and permission to refer to or quote from the articles reproduced here must be granted by the authors. Contributions are invited for the next issue of the newsletter, and should be sent to Karen McIntyre by e-mail at karen.mcintyre@stfc.ac.uk.
Microsoft Word format is preferred.

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