#
# First, install guile libraries not currently in Ubuntu or
# not up-to-date:
#
mkdir tmplibs; cd tmplibs
tar xvfz /local/xtal_packages/goosh-1.3.tar.gz
cd goosh-1.3
./configure --prefix=/usr
sudo make install
cd ..
tar xvfz /local/xtal_packages/guile-gui-0.2.tar.gz
cd guile-gui-0.2
./configure --prefix=/usr
sudo make install
cd ..
tar xvfz /local/xtal_packages/guile-gtk-0.41.tar.gz
cd guile-gtk-0.41
./configure --prefix=/usr
make
make install
cd ..
tar xvfz /local/xtal_packages/net-http-0.3.1.tar.gz
cd net-http
./configure --prefix=/usr
sudo make install
cd ../.. ; rm -rf tmplibs
#
# Second, make sure you have installed the packages
# imlib11, imlib11-dev, imlib-base
# Ubuntu installs libimlib2 y libimlib2-dev but not these ones
#
# You will need also some symbolic links. Make sure these
# links exist:
# /usr/lib/libImlib.so -> libImlib.so.11.0.0
# /usr/lib/libImlib.so.1 -> libImlib.so.11.0.0
# /usr/lib/libImlib.so.11 -> libImlib.so.11.0.0
#
# Then, the development ccp4 libs
#
cd /usr/local/
tar xvfz path-to/ccp4-onlylibs-dev.tar.gz 
cd ccp4-onlylibs-dev/
cp include/ccp4.setup-bash include/ccp4.setup
vi include/ccp4.setup # edit as appropriate
perl -pi.bak -e 's|enable_mmdbold=no|enable_mmdbold=yes|g' lib/clipper/configure*
perl -pi.bak -e 's|enable_phs=no|enable_phs=yes|g' lib/clipper/configure*
perl -pi.bak -e 's|enable_mmdb=no|enable_mmdb=yes|g' lib/clipper/configure*
perl -pi.bak -e 's|enable_minimol=no|enable_minimol=yes|g' lib/clipper/configure*
perl -pi.bak -e 's|enable_cif=no|enable_cif=yes|g' lib/clipper/configure*
perl -pi.bak -e 's|enable_ccp4=no|enable_ccp4=yes|g' lib/clipper/configure*
perl -pi.bak -e 's|enable_cns=no|enable_cns=yes|g' lib/clipper/configure*
perl -pi.bak -e 's|enable_fortran=no|enable_fortran=yes|g' lib/clipper/configure*
rm -f  include/*.bak lib/clipper/*.bak
source include/ccp4.setup
./configure --onlylibs linux
ln -s $CCP4/lib/src $CCP4/lib/clipper/ccp4
make
make install
rm $CCP4/lib/clipper/ccp4
make realclean
#
# And finally, coot
#
cd ../
tar xvfz path-to/coot-0.2.tar.gz 
cd coot-0.2/
export CPPFLAGS="-I$CCP4/lib/clipper/clipper/mmdbold"
./configure --with-mmdb-prefix=$CCP4 --with-clipper-prefix=$CCP4 --with-fftw=$CCP4 --with-ssmlib-prefix=$CCP4 --with-imlib-prefix=/usr --with-gtkcanvas-prefix=/usr -with-guile-prefix=/usr -with-guile-gtk-prefix=/usr --with-guile --with-guile-gtk --with-python --prefix=/usr/local/coot-0.2
mv src/coot_wrap_python.cc src/coot_wrap_python.cc.orig
make
make -i install
cp src/coot.py share/coot/python/coot.py
mkdir -p share/guile/gui	
cp -r /usr/share/guile/gui share/guile/
cd share/coot
tar xvfz /local/xtal_packages/reference-structures.tar.gz