CCP4 Annual developer's meeting
University of York, 28th-30th March 2006
The overall objective of the meeting should be seen in the context of the management plan for CCP4. It should provide a closer interaction between the Executive, Scientific Technical and Advisory Board and the staff employed on CCP4 contracts, and provide a forum for a general discussion between all CCP4 staff and associated developers. The STAB now cover all aspects of nthe activities, not only the automation developments.
The meeting is longer this year as in incorporates the STAB meeting organised by Tadeusz on the Tuesday afternoon and Wednesday morning.
The intention is to extract a set of goals and action points and to address any conflicts and weaknesses:
Overall the meeting aims to inform all participants of what the others are doing, leading to improved contacts between groups, improved team working and avoidance of duplication of effort.
Agenda: STAB meeting 28-29th
St William’s College, beside York Minster
Scientific and Technical Advisory Board (STAB) members: Charlie Bond, Paul Emsley, Airlie McCoy and Tadeusz Skarzynski (Chairman).
|
Time |
Topic |
Session Leader |
Tuesday 28th March
|
13:00 |
Welcome and Lunch |
Tadeusz Skarzynski |
|
14:00 |
Review of automation activities since the last meeting Overview of new developments within CCP4. Charles Ballard Working Groups Reports and discussion: "Python Libraries and Wrappers". Charles Ballard "Xml Definitions and Libraries". Martyn Winn "Test Data Sets". Maria Turkenburg "Model Generation". Charlie Bond "CCP4i, database and automation." Wendy Yang, Peter Briggs External activity update (Phenix). Airlie McCoy |
Charles Ballard |
|
16:30 |
Tea |
|
|
17:00 |
Current directions in pipeline creation in CCP4 Molecular Replacement - Alexei Vagin/Garib Murshudov, Martyn Winn/Ronan Keegan/Norman Stein, Airlie McCoy Experimental phasing, model building and structure completion - Paul Emsley/Kevin Cowtan Discussion - all |
|
|
18:30 |
END |
|
|
19:30 |
Dinner, Bedern Hall – Bartle Garth, York |
Wednesday 29th March
|
09:30 |
STAB general discussion & summary session Evolution of the overall "vision". Garib Murshudov Discussion and formulation of a new action plan (people, timelines, deliverables) |
Tadeusz Skarzynski |
Agenda: Review meeting 29-30th
St William’s College, beside York Minster
Wednesday 29th March
|
12:00 |
Lunch for all participants |
|
|
12:00 |
Closed Executive meeting |
Keith Wilson |
|
12:00 |
Closed STAB meeting |
Tadeusz Skarzynski |
|
12:30 |
Joint STAB and executive |
TS/KSW |
|
13:30 |
Session 1: Overview 13:30 Overview of CCP4: Keith Wilson 13:45 STAB meeting overview: T Skarzynski 14:00 Study weekend/Survey/Conferences/Site visits: M Howard |
Tadeusz Skarzynski |
|
14:15 |
Session 2: Core activities Release/Documentation/New software/ Distribution of core team efforts/Staff involved Review of 2005/6. Plans 2006/7 Summary of other Grants, e.g. BIOXHIT, e-htpx, PIMS: C Ballard |
Charles Ballard |
|
14:45 |
Data Collection, Processing and Diagnostics, DNA. 14:45 Overview: Phil Evans 14:55 Diamond & DNA: A Ashton 15:15 XIA. Graeme Winter 15:25 MOSFLM GUI. Geoff Battye 15:45 POINTLESS: Phil Evans 15:50 TRUNCATE: Norman Stein 15:55 Anomalous measurements: Gwyndaf Evans |
Phil Evans |
|
16:15 |
Tea |
|
|
16:30 |
Experimental Phasing. Paul Emsley. 16:30 PHASER: Arlie McCoy 16:55 HAPPY: Dan Rolfe 17:20 PIRATE: Kevin Cowtan |
Paul Emsley |
|
17:30 |
Molecular Replacement 17:30 MrBUMP: Ronan Keegan 17:50 CHAINSAW: N. Stein 18:00 MMASS & MOLREP: Fei Long 18:20 PHASER: Airlie McCoy |
Airlie McCoy |
|
19:30 |
Dinner, Jaipur Spice – 103 Haxby Road, York |
Agenda: Review meeting 29-30th
St William’s College, beside York Minster
Thursday 30th March
|
09:00 |
Refinement. 9:00 REFMAC developments: Garib Mursudov 9:30 Twinning: Andrey Lebedev 9:45 Dictionary and Ligands: Garib Murshudov |
Garib Murshudov |
|
10:00 |
Building and Graphics 10:00 BUCCANEER: Kevin Cowtan 10:15 COOT: Paul Emsley 10:30 CCP4mg: Stuart McNicholas 10:45 PISA: E Krissenel 11:00 ACORN: KSW/Yao |
Kevin Cowtan |
|
11:05 |
Coffee |
|
|
11:15 |
CCP4i 11:15 Peter Briggs |
Peter Briggs |
|
11:45 |
PIMS 11:45 The PIMS project: Rob Esnouf PIMS developments and plans: Chris Morris EBI: Kim Henrik Someone from SPORT? |
Rob Esnouf |
|
12:15 |
e-HTPX 12:15 Overview: Martyn Winn 12:30 Crystals and synchrotrons: Paul Young 12:40 Robots etc.: Rob Esnouf 12:50 e-HTPX and Diamond: Alun Ashton |
Martyn Winn |
|
13:00 |
Lunch |
|
|
13:00 |
Executive & STAB closed sessions in parallel |
|
|
14:00 |
Final Discussion Annual report: J. Naismith Future plans & Strategy Statement by Tadeusz General discussion. An agenda will be agreed at the meeting. Dates of next meetings: Exec/Annual/WG2/Developers |
Keith Wilson |
|
15:30 |
Close |
List of participants
|
Name |
Location |
Funding |
CCP4 Project |
E.mail Address |
28th |
29th |
30th |
|
Armour, Wesley |
Diamond |
Diamond |
wes.armour@diamond.ac.uk |
√ |
√ |
||
|
Ashton, Alun |
Diamond |
Diamond |
alun.ashton@diamond.ac.uk |
√ |
√ |
||
|
Ballard, Charles |
DL |
CCP4 Industry |
Core programmer |
c.c.ballard@dl.ac.uk |
√ |
√ |
√ |
|
Battye, Geoff |
MRC Cambr. |
CCP4 Industry |
MOSFLM GUI |
geoff@mrc-lmb.cam.ac.uk |
√ |
√ |
|
|
Bond, Charlie |
Dundee |
Dundee |
C.S.Bond@dundee.ac.uk |
√ |
√ |
√ |
|
|
Briggs, Peter |
DL |
CCP4 Industry |
Core programmer |
p.j.briggs@dl.ac.uk |
√ |
√ |
√ |
|
Cowtan, Kevin |
York |
Royal Society Fellowship |
cowtan@ysbl.york.ac.uk |
√ |
√ |
√ |
|
|
Emsley, Paul |
York |
BBSRC postdoc. |
emsley@ysbl.york.ac.uk |
√ |
√ |
√ |
|
|
Esnouf, Robert |
Oxford |
Oxford |
PIMS |
robert@strubi.ox.ac.uk |
√ |
||
|
Evans, Gwyndaf |
Diamond |
Diamond |
gwyndaf.evans@diamond.ac.uk |
√ |
√ |
||
|
Evans, Phil |
LMB Cambr |
MRC Staff |
pre@mrc-lmb.cam.ac.uk |
√ |
√ |
||
|
Foadi, James |
York |
Postdoc |
foadi@ysbl.york.ac.uk |
√ |
√ |
||
|
Furnham, Nick |
Cambridge |
BBSRC |
ndf20@mole.bio.cam.ac.uk |
√ |
√ |
√ |
|
|
Griffiths, Susy |
York |
PIMS |
LIMS |
susy@ysbl.york.ac.uk | |||
|
Howard M |
DL |
CCP4 Grant |
Administration |
m.e.howard@dl.ac.uk |
√ |
√ |
|
|
Keegan, Ronan |
DL |
e-htpx grant |
R.M.Keegan@dl.ac.uk |
√ |
√ |
√ |
|
|
Krissinel, Eugene |
EBI |
CCP4 Grant |
Coordinates etc. |
keb@ebi.ac.uk |
√ |
√ |
|
|
Lebedev, Andrey |
York |
BBSRC postdoc. |
lebedev@ysbl.york.ac.uk |
√ |
√ |
√ |
|
|
Lin, Bill |
DL |
CCP4 PIMS |
Bill.Lin@dl.ac.uk |
√ |
√ |
||
|
Long, Fei |
York |
BIOXHIT |
REFMAC |
fei@ysbl.york.ac.uk |
√ |
√ |
√ |
|
McCoy, Airlie |
U Cambridge |
Cambridge |
ajm201@cam.ac.uk |
√ |
√ |
√ |
|
|
McNicholas, Stuart |
York |
CCP4 Industry |
Molecular graphics |
mcnicholas@ysbl.york.ac.uk |
√ |
√ |
|
|
Morris, Chris |
DL |
CCP4 Industry |
LIMS |
C.Morris@dl.ac.uk |
√ |
√ |
|
|
Murshudov, Garib |
York |
Wellcome Fellowship |
garib@ysbl.york.ac.uk |
√ |
√ |
√ |
|
|
Naismith, James |
St. Andrews |
Dundee |
naismith@st-and.ac.uk |
√ |
|||
|
Noble, Martin |
Univ. Oxford |
Oxford |
martin.noble@biop.ox.ac.uk |
√ |
√ |
√ |
|
|
Powell, Harry |
LMB Cambr |
CCP4 Grant |
MOSFLM |
harry@mrc-lmb.cam.ac.uk |
√ |
√ |
|
|
Remacle, Francois |
Daresbury |
CCP4 Industry |
Core |
fr45@dl.ac.uk |
√ |
√ |
√ |
|
Rolfe, Daniel |
Daresbury |
CCP4 Industry |
Automation |
d.j.rolfe@dl.ac.uk |
√ |
√ |
√ |
|
Skarzynski, Tadeusz |
GSK |
GSK |
STAB |
tadeusz.j.skarzynski@gsk.com |
√ |
√ |
√ |
|
Stein, Norman |
Daresbury |
CCP4 Industry |
Automation |
n.d.stein@dl.ac.uk |
√ |
√ |
√ |
|
Turkenburg, Maria |
York |
CCP4 Industry |
Automation |
mgwt@ysbl.york.ac.uk |
√ |
√ |
√ |
|
Vagin, Alexei |
York |
BBSRC postdoc. |
alexei@ysbl.york.ac.uk |
√ |
√ |
√ |
|
|
Wilson, Keith |
York |
York |
keith@ysbl.york.ac.uk |
√ |
√ |
√ |
|
|
Winn, Martyn |
DL |
CCP4 Grant |
Core programmer |
m.d.winn@dl.ac.uk |
√ |
√ |
√ |
|
Winter, Graeme |
DL |
e-htpx |
G.Winter@dl.ac.uk |
√ |
|||
|
Yang, Wanjuan |
CCP4 BIOXHIT |
w.yang@dl.ac.uk |
√ |
√ |
√ |
||
|
Yao Jia-Xing |
York |
CCP4 Industry |
yao@ysbl.york.ac.uk |
√ |
√ |
√ |