CCP4 Workshop

Tokyo, Japan

01 Sep. 2008 – 05 Sep. 2008

General Structure:

Mornings	Lectures
Afternoon	Tutorials
Evening	Problem Solving

Tutors:

G.Murshudov (York), P.Emsley (Oxford), J. Debreczeni (AstraZeneca), G. Bunkoczi (Cambridge), C. Ballard (Daresbury), S.Cohen (NKI-Amsterdam), V.Lamzin (EMBL-Hamburg), E.Krissinel (EBI-Cambridge), R Pannu (Leiden), P.Skubak (Leiden), T. Matsuura (PDBj-Osaka)

Mon 1 Sept.	Data processing		Comments
9:55	1a. Introduction and Welcome
10:00	1b. Data Processing using MOSFLM	J. Debreczeni
11:00	Coffee
11:30	1c. Scaling and Merging	J. Debreczeni
	1d. Crystal peculiarities (twin and all that)		Data quality (sfcheck type)
13:00	Lunch
14:00	Tutorial: Data processing		Imosflm, Mosflm, scala
Tue 2 Sept.	Experimental Phasing
9:00	2a. Maximum Likelihood	R. Pannu
9:30	2b BP3	R. Pannu
10:15	2c Phaser-SAD	G. Bunkoczi
11:00	Coffee
11:30	2d. Density Modification	P.Emsley
12:15	2e CRANK	R.Pannu
13:00	Lunch
14:00	Tutorial: Experimental phasing and density modification		Crank, phaser, dm
Wed 3 Sept.	Molecular Replacement
9:00	3a. Molrep	G. Murshudov
9:45	3b. Phaser-MR	G. Bunkoczi
10:30	3c. MrBUMP	C. Ballard
11:00	Coffee
11:30	3d. BALBES	G. Murshudov
12:15	4a. ARP/wARP	V.Lamzin
13:00	Lunch
14:00	Tutorial: Molecular Replacement: MOLREP, Phaser and pipelines
Thursday 4 Sept.	Refinement and building
9:00	4b. Refmac	P.Skubak
9:45	4c. ARP-ligands	S.Cohen
11:00	Coffee
11:30	4d. Model completion	P. Emsley
12:15	5a. Validation in Coot	P. Emsley
13:00	Lunch
14:00	Tutorial: Refinement and building: REFMAC, ARP/WARP, COOT
Friday 5 Sept.	Model Validation
9:00
9:45	5b. Deposition Japan	T. Matsuura
10:30	6a. CCP4MG	C. Ballard(?)
11:00	Coffee
11:30	5c. SSM	E. Krissinel
12:15	5d. PISA	E. Krissinel
13:00	Lunch
14:00	Tutorial: PISA, SSM

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